Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSBP3Q9BWW4 AJ011931.1-201ENST00000618749 2492 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC015656.1-201ENST00000624209 3578 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC004899.1-201ENST00000424687 1714 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC244394.1-201ENST00000435000 1665 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AL008718.2-201ENST00000609206 1313 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 BCYRN1-201ENST00000418539 200 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC013355.1-201ENST00000562625 723 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 BNIP3P13-201ENST00000599968 566 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 MIR6720-201ENST00000611664 98 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC004923.1-202ENST00000642106 209 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC005912.2-201ENST00000619492 2400 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSBP3Q9BWW4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 AC018442.1-201ENST00000421439 2061 ntBASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SSBP3Q9BWW4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms