Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ABCA3Q99758 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ABCA3Q99758 AC041040.1-201ENST00000425197 460 ntBASIC18.57■□□□□ 0.56
ABCA3Q99758 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC18.57■□□□□ 0.56
ABCA3Q99758 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ABCA3Q99758 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCA3Q99758 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ABCA3Q99758 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ABCA3Q99758 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ABCA3Q99758 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ABCA3Q99758 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCA3Q99758 AP000533.1-201ENST00000456143 1177 ntBASIC18.56■□□□□ 0.56
ABCA3Q99758 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCA3Q99758 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCA3Q99758 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.56■□□□□ 0.56
ABCA3Q99758 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.56■□□□□ 0.56
ABCA3Q99758 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC18.56■□□□□ 0.56
ABCA3Q99758 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCA3Q99758 AL022313.4-201ENST00000562756 2046 ntBASIC18.56■□□□□ 0.56
ABCA3Q99758 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ABCA3Q99758 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.56■□□□□ 0.56
ABCA3Q99758 AC007950.2-201ENST00000615045 2347 ntBASIC18.56■□□□□ 0.56
ABCA3Q99758 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 POP5-201ENST00000341039 913 ntTSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC18.55■□□□□ 0.56
ABCA3Q99758 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC18.55■□□□□ 0.56
ABCA3Q99758 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.55■□□□□ 0.56
ABCA3Q99758 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.55■□□□□ 0.56
ABCA3Q99758 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.55■□□□□ 0.56
ABCA3Q99758 CETN3-205ENST00000522842 664 ntTSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC18.55■□□□□ 0.56
ABCA3Q99758 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.55■□□□□ 0.56
ABCA3Q99758 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ABCA3Q99758 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ABCA3Q99758 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 TPT1P9-201ENST00000413759 514 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 AL359092.2-201ENST00000423330 585 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 AP000920.1-201ENST00000531824 344 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC18.54■□□□□ 0.56
ABCA3Q99758 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC18.54■□□□□ 0.56
ABCA3Q99758 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 AC254633.1-201ENST00000606790 345 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC18.54■□□□□ 0.56
ABCA3Q99758 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
ABCA3Q99758 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ABCA3Q99758 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.54■□□□□ 0.56
ABCA3Q99758 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA3Q99758 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 TUBB8P4-201ENST00000511806 1324 ntBASIC18.54■□□□□ 0.56
ABCA3Q99758 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.54■□□□□ 0.56
ABCA3Q99758 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms