Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.99■□□□□ 0.95
SIN3AQ96ST3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 EIF4HP1-201ENST00000453115 687 ntBASIC20.99■□□□□ 0.95
SIN3AQ96ST3 AKR7A2P1-201ENST00000460134 915 ntBASIC20.99■□□□□ 0.95
SIN3AQ96ST3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 RCC2P8-201ENST00000502779 1035 ntBASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 ACTG1P17-201ENST00000558391 1119 ntBASIC20.99■□□□□ 0.95
SIN3AQ96ST3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 AC041040.2-201ENST00000622926 2899 ntBASIC20.99■□□□□ 0.95
SIN3AQ96ST3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC20.99■□□□□ 0.95
SIN3AQ96ST3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AC106794.1-201ENST00000506935 792 ntBASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 LAP3P2-201ENST00000454686 1454 ntBASIC20.98■□□□□ 0.95
SIN3AQ96ST3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 AC005840.4-201ENST00000541242 2494 ntBASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIN3AQ96ST3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 SPTLC1P5-201ENST00000450718 252 ntBASIC20.97■□□□□ 0.95
SIN3AQ96ST3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIN3AQ96ST3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms