Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC005562.1-201ENST00000583030 3219 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AL138725.1-201ENST00000407347 1314 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 AC015818.8-201ENST00000587907 1519 ntBASIC14.1□□□□□ -0.15
VPS33AQ96AX1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS33AQ96AX1 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC104596.2-201ENST00000512793 793 ntBASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC008761.3-201ENST00000624803 892 ntBASIC14.09□□□□□ -0.15
VPS33AQ96AX1 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
VPS33AQ96AX1 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
VPS33AQ96AX1 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 RN7SKP230-201ENST00000365642 335 ntBASIC14.08□□□□□ -0.16
VPS33AQ96AX1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 SOCS2P1-201ENST00000417727 557 ntBASIC14.08□□□□□ -0.16
VPS33AQ96AX1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 GCOM2-201ENST00000509133 1104 ntBASIC14.08□□□□□ -0.16
VPS33AQ96AX1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms