Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 AC087499.6-201ENST00000411576 835 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 AL080243.2-201ENST00000418783 582 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
HPS1Q92902 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.55□□□□□ -0.24
HPS1Q92902 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 AL049829.1-201ENST00000465411 156 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 RN7SL618P-201ENST00000477850 296 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.55□□□□□ -0.24
HPS1Q92902 BANF1P1-201ENST00000553684 263 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 AL157762.1-201ENST00000619612 415 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 AC009118.3-201ENST00000622896 873 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HPS1Q92902 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 ANKRD19P-201ENST00000338192 862 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.54□□□□□ -0.24
HPS1Q92902 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 SPDYE17-201ENST00000412399 783 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 DFFBP1-201ENST00000433250 979 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.54□□□□□ -0.24
HPS1Q92902 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 AC055748.1-201ENST00000489836 959 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 AC026616.1-201ENST00000523157 525 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC13.54□□□□□ -0.24
HPS1Q92902 TP53TG3HP-202ENST00000569755 579 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.54□□□□□ -0.24
HPS1Q92902 MIR6069-201ENST00000620069 79 ntBASIC13.54□□□□□ -0.24
HPS1Q92902 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.54□□□□□ -0.24
HPS1Q92902 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HPS1Q92902 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.54□□□□□ -0.24
HPS1Q92902 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms