Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 SNORA80B-201ENST00000383906 136 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL356417.2-201ENST00000419064 395 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CBWD5-208ENST00000429800 1234 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 WSB1-213ENST00000583193 552 ntTSL 4 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MIA-203ENST00000594436 507 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC092723.2-201ENST00000624955 793 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 UBR1-212ENST00000627960 189 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC008620.2-201ENST00000510294 1569 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC245297.1-201ENST00000313342 933 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RNU4-8P-201ENST00000364936 141 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 APOBEC3F-202ENST00000381565 616 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL133517.1-201ENST00000413412 748 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 VDAC1P13-201ENST00000447826 859 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RN7SL617P-201ENST00000485298 308 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RPLP0P2-204ENST00000490750 961 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 DDX11L8-201ENST00000535849 366 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 RBM17P4-201ENST00000558517 1192 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC124319.1-201ENST00000576808 653 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AC130469.2-201ENST00000625112 1092 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL139035.1-202ENST00000626308 565 ntTSL 4 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 CICP11-201ENST00000434745 2827 ntBASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
SYNE2Q8WXH0 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TREM2-201ENST00000338469 860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC010395.2-201ENST00000509899 904 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL662791.5-202ENST00000623946 461 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AP000925.1-201ENST00000425960 1449 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC117503.4-201ENST00000623229 1418 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RPS16-201ENST00000251453 560 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RPSAP46-201ENST00000428316 882 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC079988.1-201ENST00000432984 544 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 IL12A-205ENST00000480787 863 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RN7SL328P-201ENST00000484033 300 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 MIR4294-201ENST00000584548 76 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AC079779.3-227ENST00000591927 860 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 AL513478.3-201ENST00000641038 1095 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 TBC1D3P1-201ENST00000590047 1693 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 KRT8P43-201ENST00000406052 1458 ntBASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNE2Q8WXH0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms