Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 MEIS3P1-201ENST00000495167 958 ntBASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 AC011498.7-201ENST00000624986 2027 ntBASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAB3IL1Q8TBN0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC003102.2-201ENST00000589195 1469 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC114501.2-201ENST00000439631 535 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC022616.1-201ENST00000518688 554 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC131206.1-201ENST00000538078 1211 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC044860.1-202ENST00000559481 777 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC093813.1-201ENST00000605066 256 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 AC111170.3-201ENST00000624282 2464 ntBASIC14.63□□□□□ -0.07
RAB3IL1Q8TBN0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3IL1Q8TBN0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3IL1Q8TBN0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms