Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 SHC1P1-201ENST00000425230 1745 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC041040.2-201ENST00000622926 2899 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 MST1P2-201ENST00000457982 2291 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC026954.1-201ENST00000429771 1293 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CTBP2P5-201ENST00000454986 1264 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC023310.1-201ENST00000554836 735 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AP006547.1-201ENST00000563435 692 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AL512343.1-201ENST00000605837 169 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AL162274.1-201ENST00000617191 1098 ntBASIC13.68□□□□□ -0.22
NUP43Q8NFH3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NUP43Q8NFH3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 MIR326-201ENST00000362220 95 ntBASIC13.67□□□□□ -0.22
NUP43Q8NFH3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 AC010141.1-201ENST00000411585 623 ntBASIC13.67□□□□□ -0.22
NUP43Q8NFH3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 RAB43P1-201ENST00000561790 589 ntBASIC13.67□□□□□ -0.22
NUP43Q8NFH3 AC005586.2-201ENST00000563946 837 ntBASIC13.67□□□□□ -0.22
NUP43Q8NFH3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms