Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC084346.2-201ENST00000607097 949 ntBASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AL358472.3-201ENST00000608147 415 ntBASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PPT1-213ENST00000641319 2388 ntBASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AHCYP2-201ENST00000430630 1300 ntBASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SIMC1Q8NDZ2 AC015688.4-201ENST00000580780 1647 ntBASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 ST20-AS1-201ENST00000560255 4223 ntBASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AC015802.1-201ENST00000588104 1449 ntBASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 MIR658-201ENST00000385210 100 ntBASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AP001002.3-201ENST00000623482 206 ntBASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIMC1Q8NDZ2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CNN2P10-201ENST00000443067 918 ntBASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CSF2RBP1-201ENST00000447905 391 ntBASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms