Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 MIR4683-201ENST00000579659 81 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AL162274.1-201ENST00000617191 1098 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC027601.3-201ENST00000622907 509 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC006504.5-208ENST00000588784 2401 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AC009093.10-201ENST00000641956 1442 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TTC9CQ8N5M4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.58□□□□□ -0.55
TTC9CQ8N5M4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC112492.5-201ENST00000421897 457 ntBASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC023310.1-201ENST00000554836 735 ntBASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 MIR193BHG-211ENST00000641433 5365 ntBASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
TTC9CQ8N5M4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms