Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AP000593.2-201ENST00000542775 1433 ntBASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 USP17L6P-201ENST00000382470 1197 ntBASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC098850.1-201ENST00000419919 790 ntBASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 DFFBP1-201ENST00000433250 979 ntBASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 KRT18P8-201ENST00000581937 1246 ntBASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 AL391825.1-201ENST00000457671 1364 ntBASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC170Q8IYT3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 BAP1-211ENST00000615113 489 ntBASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 KRT8P28-201ENST00000433288 1390 ntBASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AC114271.1-201ENST00000612689 2813 ntBASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC170Q8IYT3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms