Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 AL136379.1-201ENST00000623471 2642 ntBASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 POM121L10P-201ENST00000436994 1285 ntBASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 AC027237.1-201ENST00000560942 655 ntBASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 AC005324.6-201ENST00000587972 613 ntBASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SCUBE3Q8IX30 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 MBLAC2-202ENST00000514906 1936 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AC004899.1-201ENST00000424687 1714 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 TUBB8P8-201ENST00000458717 1058 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RPL18P13-201ENST00000478088 569 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AL160314.3-201ENST00000556041 767 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AL133445.2-201ENST00000611191 527 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AL023803.2-201ENST00000620080 638 ntBASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms