Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 MIR661-201ENST00000384842 89 ntBASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC134915.1-201ENST00000426461 574 ntBASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 MYCLP2-201ENST00000449268 967 ntBASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC004066.1-201ENST00000502488 802 ntBASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC140912.1-201ENST00000577171 1054 ntBASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC007431.3-201ENST00000623221 587 ntBASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TMEM53Q6P2H8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 CICP1-201ENST00000416803 2410 ntBASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 VDAC1P7-201ENST00000462417 847 ntBASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC190387.1-201ENST00000551683 408 ntBASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM53Q6P2H8 AC027307.3-201ENST00000594262 1100 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms