Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 MYADML-201ENST00000474610 2147 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AL354877.1-201ENST00000424412 413 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AC012441.2-201ENST00000444843 739 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CICP12-201ENST00000455801 843 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 PFN1P12-201ENST00000455938 534 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 TUBB8P8-201ENST00000458717 1058 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AL583810.1-201ENST00000553344 1045 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AC132192.2-201ENST00000596206 1147 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CICP20-201ENST00000443330 2801 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 AC007686.3-201ENST00000619017 3487 ntBASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CCDC144NLQ6NUI1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 FP325330.2-201ENST00000624219 5630 ntBASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 AC139749.1-202ENST00000617529 3139 ntBASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 KHSRPP1-201ENST00000427983 1768 ntBASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.88□□□□□ -0.51
CCDC144NLQ6NUI1 AC021723.1-201ENST00000486306 515 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms