Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.36■□□□□ 0.21
HERC4Q5GLZ8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 ST20-AS1-201ENST00000560255 4223 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 MIR33B-201ENST00000385104 96 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 CNN2P10-201ENST00000443067 918 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 HOMER2P2-201ENST00000451621 847 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC104982.3-201ENST00000581995 514 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC092978.1-202ENST00000637590 1327 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 KHSRPP1-201ENST00000427983 1768 ntBASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.35■□□□□ 0.21
HERC4Q5GLZ8 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CHMP1AP1-201ENST00000445563 662 ntBASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HERC4Q5GLZ8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms