Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC005324.6-201ENST00000587972 613 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 AL359881.2-201ENST00000602973 570 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 AL008721.1-201ENST00000609964 604 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 TUBB8P4-201ENST00000511806 1324 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 KRT8P29-201ENST00000420409 1371 ntBASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN20Q4JDL3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 VDAC1P1-201ENST00000439229 848 ntBASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AC022748.3-201ENST00000621828 275 ntBASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AC011474.4-201ENST00000623523 2076 ntBASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTPN20Q4JDL3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 OR2I1P-209ENST00000641730 5365 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 KRT18P36-201ENST00000411618 1276 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 TUBB8P8-201ENST00000458717 1058 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 RPL18P13-201ENST00000478088 569 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 SCARNA21-201ENST00000517026 139 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC003686.1-201ENST00000550956 1034 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms