Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFX7Q2KHR2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 RN7SL181P-201ENST00000462921 277 ntBASIC17.44■□□□□ 0.38
RFX7Q2KHR2 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 PHBP15-201ENST00000574228 665 ntBASIC17.44■□□□□ 0.38
RFX7Q2KHR2 AC138894.2-201ENST00000602838 371 ntBASIC17.44■□□□□ 0.38
RFX7Q2KHR2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 CAP2P1-201ENST00000557743 1390 ntBASIC17.44■□□□□ 0.38
RFX7Q2KHR2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
RFX7Q2KHR2 FRMPD2B-201ENST00000431305 1347 ntBASIC17.44■□□□□ 0.38
RFX7Q2KHR2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 MIR3188-201ENST00000583494 85 ntBASIC17.43■□□□□ 0.38
RFX7Q2KHR2 RN7SL555P-201ENST00000584742 339 ntBASIC17.43■□□□□ 0.38
RFX7Q2KHR2 AC051619.9-201ENST00000623237 597 ntBASIC17.43■□□□□ 0.38
RFX7Q2KHR2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.43■□□□□ 0.38
RFX7Q2KHR2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AC026316.1-201ENST00000398900 414 ntBASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AC092580.1-201ENST00000433998 658 ntBASIC17.42■□□□□ 0.38
RFX7Q2KHR2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 IGLV3-15-201ENST00000518356 244 ntBASIC17.42■□□□□ 0.38
RFX7Q2KHR2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.42■□□□□ 0.38
RFX7Q2KHR2 AC026803.1-201ENST00000569130 274 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms