Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DSC1Q08554 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.32■□□□□ 0.04
DSC1Q08554 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
DSC1Q08554 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
DSC1Q08554 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DSC1Q08554 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DSC1Q08554 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DSC1Q08554 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 AL591122.2-201ENST00000624125 1853 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.31■□□□□ 0.04
DSC1Q08554 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.31■□□□□ 0.04
DSC1Q08554 AC018463.1-201ENST00000456674 917 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.31■□□□□ 0.04
DSC1Q08554 CTBP2P4-201ENST00000513884 920 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.31■□□□□ 0.04
DSC1Q08554 AC007952.4-201ENST00000573866 637 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.31■□□□□ 0.04
DSC1Q08554 RN7SL470P-201ENST00000583069 259 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.31■□□□□ 0.04
DSC1Q08554 AC105137.3-201ENST00000617588 984 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 LINC00115-201ENST00000473798 1317 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.31■□□□□ 0.04
DSC1Q08554 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.31■□□□□ 0.04
DSC1Q08554 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.31■□□□□ 0.04
DSC1Q08554 RN7SL832P-201ENST00000607781 1756 ntBASIC15.31■□□□□ 0.04
DSC1Q08554 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DSC1Q08554 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
DSC1Q08554 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.31■□□□□ 0.04
DSC1Q08554 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.3■□□□□ 0.04
DSC1Q08554 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
DSC1Q08554 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.3■□□□□ 0.04
DSC1Q08554 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.3■□□□□ 0.04
DSC1Q08554 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.3■□□□□ 0.04
DSC1Q08554 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 AC006987.1-201ENST00000413610 527 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 BX679664.3-201ENST00000414070 555 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 AC090505.1-201ENST00000430515 1834 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.3■□□□□ 0.04
DSC1Q08554 AC098934.1-203ENST00000442868 1262 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.3■□□□□ 0.04
DSC1Q08554 AC113935.1-201ENST00000471722 555 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DSC1Q08554 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.3■□□□□ 0.04
DSC1Q08554 AC113367.3-201ENST00000508316 1912 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 AC095040.1-201ENST00000513286 675 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 RNA5SP417-201ENST00000516459 108 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 AC103702.1-201ENST00000548801 2630 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.3■□□□□ 0.04
DSC1Q08554 AC090502.4-201ENST00000551714 1386 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 HERC2P11-201ENST00000562845 725 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.3■□□□□ 0.04
DSC1Q08554 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.3■□□□□ 0.04
DSC1Q08554 AC100756.2-201ENST00000569537 736 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 AC007250.1-201ENST00000608934 338 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 AL021707.6-201ENST00000609212 491 ntBASIC15.3■□□□□ 0.04
DSC1Q08554 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DSC1Q08554 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.3■□□□□ 0.04
DSC1Q08554 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DSC1Q08554 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DSC1Q08554 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.29■□□□□ 0.04
DSC1Q08554 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DSC1Q08554 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.29■□□□□ 0.04
DSC1Q08554 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DSC1Q08554 AC007952.5-201ENST00000572818 1486 ntBASIC15.29■□□□□ 0.04
DSC1Q08554 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.29■□□□□ 0.04
DSC1Q08554 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms