Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 MARK2P9-201ENST00000430958 1727 ntBASIC13.18□□□□□ -0.3
CDK5Q00535 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CDK5Q00535 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CDK5Q00535 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CDK5Q00535 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 KRT18P28-201ENST00000453838 1332 ntBASIC13.17□□□□□ -0.3
CDK5Q00535 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 AC009093.10-201ENST00000641956 1442 ntBASIC13.17□□□□□ -0.3
CDK5Q00535 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CDK5Q00535 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 RN7SKP175-201ENST00000408472 289 ntBASIC13.17□□□□□ -0.3
CDK5Q00535 BASP1P1-201ENST00000430708 665 ntBASIC13.17□□□□□ -0.3
CDK5Q00535 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.17□□□□□ -0.3
CDK5Q00535 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.17□□□□□ -0.3
CDK5Q00535 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.17□□□□□ -0.3
CDK5Q00535 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 ENPP7P14-201ENST00000621765 1040 ntBASIC13.17□□□□□ -0.3
CDK5Q00535 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDK5Q00535 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDK5Q00535 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CDK5Q00535 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDK5Q00535 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.16□□□□□ -0.3
CDK5Q00535 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.16□□□□□ -0.3
CDK5Q00535 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDK5Q00535 AC009093.2-202ENST00000620513 2079 ntBASIC13.16□□□□□ -0.3
CDK5Q00535 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms