Protein–RNA interactions for Protein: P78347

GTF2I, General transcription factor II-I, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP78347 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 AC067931.2-201ENST00000623655 2003 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GTF2IP78347 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 AC023157.3-201ENST00000619086 2088 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.35■□□□□ 0.37
GTF2IP78347 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GTF2IP78347 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.35■□□□□ 0.37
GTF2IP78347 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 AC018638.5-201ENST00000450885 754 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 AL157792.1-201ENST00000488281 530 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.35■□□□□ 0.37
GTF2IP78347 LINC00634-202ENST00000505157 222 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 AC084752.1-201ENST00000509766 622 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 AC095040.1-201ENST00000513286 675 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GTF2IP78347 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.35■□□□□ 0.37
GTF2IP78347 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.35■□□□□ 0.37
GTF2IP78347 AL133467.4-201ENST00000602953 725 ntBASIC17.35■□□□□ 0.37
GTF2IP78347 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.35■□□□□ 0.37
GTF2IP78347 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GTF2IP78347 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.35■□□□□ 0.37
GTF2IP78347 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GTF2IP78347 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GTF2IP78347 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
GTF2IP78347 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.35■□□□□ 0.37
GTF2IP78347 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2IP78347 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 PYY2-201ENST00000315776 282 ntBASIC17.34■□□□□ 0.37
GTF2IP78347 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
GTF2IP78347 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.34■□□□□ 0.37
GTF2IP78347 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GTF2IP78347 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.34■□□□□ 0.37
GTF2IP78347 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2IP78347 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2IP78347 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.34■□□□□ 0.37
GTF2IP78347 AC068867.1-201ENST00000559855 150 ntBASIC17.34■□□□□ 0.37
GTF2IP78347 AL021707.6-201ENST00000609212 491 ntBASIC17.34■□□□□ 0.37
GTF2IP78347 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GTF2IP78347 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
GTF2IP78347 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.34■□□□□ 0.37
GTF2IP78347 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2IP78347 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
GTF2IP78347 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.33■□□□□ 0.37
GTF2IP78347 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2IP78347 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GTF2IP78347 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.33■□□□□ 0.37
GTF2IP78347 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GTF2IP78347 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2IP78347 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GTF2IP78347 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
GTF2IP78347 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2IP78347 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.33■□□□□ 0.37
GTF2IP78347 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2IP78347 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.33■□□□□ 0.37
GTF2IP78347 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GTF2IP78347 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GTF2IP78347 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.33■□□□□ 0.37
GTF2IP78347 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
GTF2IP78347 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms