Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 TEX30-205ENST00000376029 959 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 AC007969.1-201ENST00000433675 447 ntBASIC10.37□□□□□ -0.75
RPL39P62891 DRD5P1-201ENST00000456605 1438 ntBASIC10.37□□□□□ -0.75
RPL39P62891 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 AC023141.5-201ENST00000458585 616 ntBASIC10.37□□□□□ -0.75
RPL39P62891 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.37□□□□□ -0.75
RPL39P62891 HLA-V-204ENST00000476601 1289 ntBASIC10.37□□□□□ -0.75
RPL39P62891 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.37□□□□□ -0.75
RPL39P62891 PGAM5P1-201ENST00000518923 814 ntBASIC10.37□□□□□ -0.75
RPL39P62891 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.37□□□□□ -0.75
RPL39P62891 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.37□□□□□ -0.75
RPL39P62891 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.37□□□□□ -0.75
RPL39P62891 MIR4469-201ENST00000583919 79 ntBASIC10.37□□□□□ -0.75
RPL39P62891 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.37□□□□□ -0.75
RPL39P62891 AC004835.2-201ENST00000603762 682 ntBASIC10.37□□□□□ -0.75
RPL39P62891 AL138828.2-201ENST00000615812 383 ntBASIC10.37□□□□□ -0.75
RPL39P62891 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.37□□□□□ -0.75
RPL39P62891 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
RPL39P62891 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.37□□□□□ -0.75
RPL39P62891 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.37□□□□□ -0.75
RPL39P62891 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 BEND3P3-201ENST00000611030 2440 ntBASIC10.36□□□□□ -0.75
RPL39P62891 REXO1L1P-201ENST00000379010 6598 ntBASIC10.36□□□□□ -0.75
RPL39P62891 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC10.36□□□□□ -0.75
RPL39P62891 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
RPL39P62891 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.36□□□□□ -0.75
RPL39P62891 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.36□□□□□ -0.75
RPL39P62891 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
RPL39P62891 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms