Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
DEFA1P59665 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.8□□□□□ -0.36
DEFA1P59665 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.8□□□□□ -0.36
DEFA1P59665 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.8□□□□□ -0.36
DEFA1P59665 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
DEFA1P59665 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
DEFA1P59665 AL031008.1-201ENST00000619963 541 ntBASIC12.8□□□□□ -0.36
DEFA1P59665 AL355877.3-201ENST00000622820 899 ntBASIC12.8□□□□□ -0.36
DEFA1P59665 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
DEFA1P59665 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.8□□□□□ -0.36
DEFA1P59665 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 DDX12P-201ENST00000432996 2947 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 HERC2P9-206ENST00000529624 5187 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA1P59665 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA1P59665 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA1P59665 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.79□□□□□ -0.36
DEFA1P59665 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms