Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH8P55286 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CDH8P55286 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 HSPA8P5-201ENST00000456928 2069 ntBASIC15.53■□□□□ 0.08
CDH8P55286 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH8P55286 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH8P55286 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH8P55286 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH8P55286 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CDH8P55286 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH8P55286 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH8P55286 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH8P55286 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH8P55286 EIF4HP1-201ENST00000453115 687 ntBASIC15.52■□□□□ 0.08
CDH8P55286 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH8P55286 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH8P55286 AC091804.1-201ENST00000486888 567 ntBASIC15.52■□□□□ 0.08
CDH8P55286 AC009779.1-201ENST00000551138 283 ntBASIC15.52■□□□□ 0.08
CDH8P55286 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH8P55286 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.52■□□□□ 0.08
CDH8P55286 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDH8P55286 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH8P55286 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH8P55286 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH8P55286 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH8P55286 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH8P55286 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDH8P55286 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CDH8P55286 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
CDH8P55286 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 AC018629.1-201ENST00000623381 1736 ntBASIC15.51■□□□□ 0.07
CDH8P55286 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 AC005089.1-201ENST00000619486 2241 ntBASIC15.51■□□□□ 0.07
CDH8P55286 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CDH8P55286 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH8P55286 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH8P55286 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 AKR7A2P1-201ENST00000460134 915 ntBASIC15.51■□□□□ 0.07
CDH8P55286 HIST2H2BC-201ENST00000498492 580 ntBASIC15.51■□□□□ 0.07
CDH8P55286 AC022217.1-201ENST00000521069 738 ntBASIC15.51■□□□□ 0.07
CDH8P55286 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 AL136295.7-201ENST00000619226 1200 ntBASIC15.51■□□□□ 0.07
CDH8P55286 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms