Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE1AP54750 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PDE1AP54750 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 MIR663B-201ENST00000408361 115 ntBASIC17.73■□□□□ 0.43
PDE1AP54750 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PDE1AP54750 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE1AP54750 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE1AP54750 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE1AP54750 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE1AP54750 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.73■□□□□ 0.43
PDE1AP54750 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.73■□□□□ 0.43
PDE1AP54750 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.73■□□□□ 0.43
PDE1AP54750 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDE1AP54750 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 LAP3P2-201ENST00000454686 1454 ntBASIC17.72■□□□□ 0.43
PDE1AP54750 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.72■□□□□ 0.43
PDE1AP54750 KRT18P36-201ENST00000411618 1276 ntBASIC17.72■□□□□ 0.43
PDE1AP54750 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.72■□□□□ 0.43
PDE1AP54750 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.72■□□□□ 0.43
PDE1AP54750 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.72■□□□□ 0.43
PDE1AP54750 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 AC124068.2-201ENST00000569473 1109 ntBASIC17.72■□□□□ 0.43
PDE1AP54750 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.72■□□□□ 0.43
PDE1AP54750 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 AGAP10P-201ENST00000454844 2418 ntBASIC17.72■□□□□ 0.43
PDE1AP54750 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.72■□□□□ 0.43
PDE1AP54750 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDE1AP54750 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDE1AP54750 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDE1AP54750 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.71■□□□□ 0.43
PDE1AP54750 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE1AP54750 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE1AP54750 VDAC1P1-201ENST00000439229 848 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms