Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PDX1P52945 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.19□□□□□ -0.14
PDX1P52945 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 AC007292.2-201ENST00000593524 1812 ntBASIC14.19□□□□□ -0.14
PDX1P52945 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDX1P52945 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.19□□□□□ -0.14
PDX1P52945 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDX1P52945 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.18□□□□□ -0.14
PDX1P52945 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.18□□□□□ -0.14
PDX1P52945 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
PDX1P52945 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 AC232323.1-201ENST00000540724 2099 ntBASIC14.18□□□□□ -0.14
PDX1P52945 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.18□□□□□ -0.14
PDX1P52945 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 AC026316.1-201ENST00000398900 414 ntBASIC14.18□□□□□ -0.14
PDX1P52945 TLE1P1-201ENST00000422965 589 ntBASIC14.18□□□□□ -0.14
PDX1P52945 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.18□□□□□ -0.14
PDX1P52945 CICP12-201ENST00000455801 843 ntBASIC14.18□□□□□ -0.14
PDX1P52945 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.18□□□□□ -0.14
PDX1P52945 RN7SL181P-201ENST00000462921 277 ntBASIC14.18□□□□□ -0.14
PDX1P52945 AC104784.1-201ENST00000473096 294 ntBASIC14.18□□□□□ -0.14
PDX1P52945 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PDX1P52945 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.18□□□□□ -0.14
PDX1P52945 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.18□□□□□ -0.14
PDX1P52945 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.18□□□□□ -0.14
PDX1P52945 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
PDX1P52945 AL157813.1-201ENST00000612996 587 ntBASIC14.18□□□□□ -0.14
PDX1P52945 AC103691.2-201ENST00000618824 433 ntBASIC14.18□□□□□ -0.14
PDX1P52945 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.18□□□□□ -0.14
PDX1P52945 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PDX1P52945 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PDX1P52945 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.18□□□□□ -0.14
PDX1P52945 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.18□□□□□ -0.14
PDX1P52945 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.18□□□□□ -0.14
PDX1P52945 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDX1P52945 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
PDX1P52945 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 TBC1D3J-201ENST00000620719 1426 ntBASIC14.17□□□□□ -0.14
PDX1P52945 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDX1P52945 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms