Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 SLC13A2-202ENST00000444914 2855 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 LAGE3P1-201ENST00000425356 484 ntBASIC14.34□□□□□ -0.11
GTF2A1P52655 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.34□□□□□ -0.11
GTF2A1P52655 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.34□□□□□ -0.11
GTF2A1P52655 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.34□□□□□ -0.11
GTF2A1P52655 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
GTF2A1P52655 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.34□□□□□ -0.11
GTF2A1P52655 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 PES1-203ENST00000402281 2760 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GTF2A1P52655 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.34□□□□□ -0.11
GTF2A1P52655 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.34□□□□□ -0.11
GTF2A1P52655 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GTF2A1P52655 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.33□□□□□ -0.11
GTF2A1P52655 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.33□□□□□ -0.11
GTF2A1P52655 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC14.33□□□□□ -0.11
GTF2A1P52655 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GTF2A1P52655 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
GTF2A1P52655 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
GTF2A1P52655 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GTF2A1P52655 AL355102.3-201ENST00000554299 1678 ntBASIC14.33□□□□□ -0.11
GTF2A1P52655 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 AC073621.1-201ENST00000392730 636 ntBASIC14.33□□□□□ -0.12
GTF2A1P52655 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.33□□□□□ -0.12
GTF2A1P52655 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.33□□□□□ -0.12
GTF2A1P52655 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 SCARNA2-201ENST00000458748 420 ntBASIC14.33□□□□□ -0.12
GTF2A1P52655 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.33□□□□□ -0.12
GTF2A1P52655 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 AC093458.2-201ENST00000623150 629 ntBASIC14.33□□□□□ -0.12
GTF2A1P52655 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 AC107918.4-202ENST00000641623 219 ntBASIC14.33□□□□□ -0.12
GTF2A1P52655 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC14.33□□□□□ -0.12
GTF2A1P52655 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GTF2A1P52655 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC14.33□□□□□ -0.12
GTF2A1P52655 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms