Protein–RNA interactions for Protein: P51684

CCR6, C-C chemokine receptor type 6, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR6P51684 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CCR6P51684 AC027369.3-201ENST00000530465 3707 ntBASIC12.5□□□□□ -0.41
CCR6P51684 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.5□□□□□ -0.41
CCR6P51684 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCR6P51684 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.5□□□□□ -0.41
CCR6P51684 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCR6P51684 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CCR6P51684 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.49□□□□□ -0.41
CCR6P51684 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CCR6P51684 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AC131902.2-201ENST00000566892 2172 ntBASIC12.49□□□□□ -0.41
CCR6P51684 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.49□□□□□ -0.41
CCR6P51684 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CCR6P51684 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 TOMM22P5-201ENST00000416399 439 ntBASIC12.49□□□□□ -0.41
CCR6P51684 RNA5SP416-201ENST00000516838 111 ntBASIC12.49□□□□□ -0.41
CCR6P51684 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 AC026150.2-201ENST00000564693 1156 ntBASIC12.49□□□□□ -0.41
CCR6P51684 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.49□□□□□ -0.41
CCR6P51684 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.49□□□□□ -0.41
CCR6P51684 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 AL928654.5-201ENST00000624831 2501 ntBASIC12.49□□□□□ -0.41
CCR6P51684 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.49□□□□□ -0.41
CCR6P51684 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.49□□□□□ -0.41
CCR6P51684 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CCR6P51684 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCR6P51684 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CCR6P51684 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 AL355102.3-201ENST00000554299 1678 ntBASIC12.48□□□□□ -0.41
CCR6P51684 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCR6P51684 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 AL158070.2-201ENST00000623713 1621 ntBASIC12.48□□□□□ -0.41
CCR6P51684 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
CCR6P51684 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CCR6P51684 AP003969.2-201ENST00000623739 2275 ntBASIC12.48□□□□□ -0.41
CCR6P51684 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.48□□□□□ -0.41
CCR6P51684 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.48□□□□□ -0.41
CCR6P51684 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CCR6P51684 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CCR6P51684 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.48□□□□□ -0.41
CCR6P51684 ADH5P3-201ENST00000433842 1137 ntBASIC12.48□□□□□ -0.41
CCR6P51684 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
CCR6P51684 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.48□□□□□ -0.41
CCR6P51684 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.48□□□□□ -0.41
CCR6P51684 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
CCR6P51684 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.48□□□□□ -0.41
CCR6P51684 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.48□□□□□ -0.41
CCR6P51684 AC025048.3-201ENST00000590609 569 ntBASIC12.48□□□□□ -0.41
CCR6P51684 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CCR6P51684 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.48□□□□□ -0.41
CCR6P51684 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.48□□□□□ -0.41
CCR6P51684 AC005702.4-201ENST00000618393 416 ntBASIC12.48□□□□□ -0.41
CCR6P51684 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.48□□□□□ -0.41
CCR6P51684 AC084121.4-201ENST00000641598 221 ntBASIC12.48□□□□□ -0.41
CCR6P51684 AC092865.6-201ENST00000642101 219 ntBASIC12.48□□□□□ -0.41
CCR6P51684 AF228730.8-201ENST00000642140 221 ntBASIC12.48□□□□□ -0.41
CCR6P51684 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms