Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TNNI2P48788 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.24■□□□□ 0.35
TNNI2P48788 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TNNI2P48788 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.24■□□□□ 0.35
TNNI2P48788 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TNNI2P48788 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNNI2P48788 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNNI2P48788 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 RPL13AP19-201ENST00000434320 584 ntBASIC17.23■□□□□ 0.35
TNNI2P48788 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 AL354861.1-201ENST00000445213 355 ntBASIC17.23■□□□□ 0.35
TNNI2P48788 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 RN7SL277P-201ENST00000481521 288 ntBASIC17.23■□□□□ 0.35
TNNI2P48788 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.23■□□□□ 0.35
TNNI2P48788 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.23■□□□□ 0.35
TNNI2P48788 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.23■□□□□ 0.35
TNNI2P48788 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.23■□□□□ 0.35
TNNI2P48788 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.23■□□□□ 0.35
TNNI2P48788 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 CICP23-201ENST00000605013 2741 ntBASIC17.23■□□□□ 0.35
TNNI2P48788 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.23■□□□□ 0.35
TNNI2P48788 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNNI2P48788 KHSRPP1-201ENST00000427983 1768 ntBASIC17.23■□□□□ 0.35
TNNI2P48788 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TNNI2P48788 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.22■□□□□ 0.35
TNNI2P48788 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 AC073869.2-201ENST00000417338 1026 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 LYPLA2P1-203ENST00000447689 696 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TNNI2P48788 TMCO5B-205ENST00000530020 894 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.22■□□□□ 0.35
TNNI2P48788 AC027237.1-201ENST00000560942 655 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.22■□□□□ 0.35
TNNI2P48788 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.22■□□□□ 0.35
TNNI2P48788 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC17.22■□□□□ 0.35
TNNI2P48788 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.22■□□□□ 0.35
TNNI2P48788 AP000322.3-201ENST00000608665 388 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.22■□□□□ 0.35
TNNI2P48788 MYO15B-237ENST00000642007 4893 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.22■□□□□ 0.35
TNNI2P48788 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 AP002353.1-201ENST00000528257 1599 ntBASIC17.22■□□□□ 0.35
TNNI2P48788 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.22■□□□□ 0.35
TNNI2P48788 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.22■□□□□ 0.35
TNNI2P48788 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TNNI2P48788 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNNI2P48788 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms