Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 RPSAP36-202ENST00000494591 1261 ntBASIC14.72□□□□□ -0.05
CHRNA4P43681 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.72□□□□□ -0.05
CHRNA4P43681 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 AL008718.2-201ENST00000609206 1313 ntBASIC14.71□□□□□ -0.05
CHRNA4P43681 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CHRNA4P43681 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 AL161932.2-201ENST00000435436 679 ntBASIC14.71□□□□□ -0.05
CHRNA4P43681 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.71□□□□□ -0.05
CHRNA4P43681 RPL13AP20-201ENST00000459725 609 ntBASIC14.71□□□□□ -0.05
CHRNA4P43681 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.71□□□□□ -0.05
CHRNA4P43681 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 AC005730.2-201ENST00000564549 1184 ntBASIC14.71□□□□□ -0.05
CHRNA4P43681 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.71□□□□□ -0.05
CHRNA4P43681 AL162426.1-201ENST00000624141 743 ntBASIC14.71□□□□□ -0.05
CHRNA4P43681 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CHRNA4P43681 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CHRNA4P43681 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CHRNA4P43681 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHRNA4P43681 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
CHRNA4P43681 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.71□□□□□ -0.06
CHRNA4P43681 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CHRNA4P43681 AC015818.8-201ENST00000587907 1519 ntBASIC14.71□□□□□ -0.06
CHRNA4P43681 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
CHRNA4P43681 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHRNA4P43681 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA4P43681 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA4P43681 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNA4P43681 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA4P43681 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRNA4P43681 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNA4P43681 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNA4P43681 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms