Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.98□□□□□ -0.49
CEACAM3P40198 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.98□□□□□ -0.49
CEACAM3P40198 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.98□□□□□ -0.49
CEACAM3P40198 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 CHMP1AP1-201ENST00000445563 662 ntBASIC11.98□□□□□ -0.49
CEACAM3P40198 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.98□□□□□ -0.49
CEACAM3P40198 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.98□□□□□ -0.49
CEACAM3P40198 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CEACAM3P40198 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC11.98□□□□□ -0.49
CEACAM3P40198 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.98□□□□□ -0.49
CEACAM3P40198 NAA38-206ENST00000576384 424 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.98□□□□□ -0.49
CEACAM3P40198 MIR6752-201ENST00000618442 71 ntBASIC11.98□□□□□ -0.49
CEACAM3P40198 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.98□□□□□ -0.49
CEACAM3P40198 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CEACAM3P40198 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.98□□□□□ -0.49
CEACAM3P40198 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CEACAM3P40198 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 AL354702.1-201ENST00000442006 1960 ntBASIC11.98□□□□□ -0.49
CEACAM3P40198 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.98□□□□□ -0.49
CEACAM3P40198 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.98□□□□□ -0.49
CEACAM3P40198 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.97□□□□□ -0.49
CEACAM3P40198 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CEACAM3P40198 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC015818.8-201ENST00000587907 1519 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CEACAM3P40198 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC009093.10-201ENST00000641956 1442 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.97□□□□□ -0.49
CEACAM3P40198 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AP003171.2-201ENST00000528208 925 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.97□□□□□ -0.49
CEACAM3P40198 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.97□□□□□ -0.49
CEACAM3P40198 AL358472.3-201ENST00000608147 415 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 MIR6074-201ENST00000612054 107 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 AC009093.2-202ENST00000620513 2079 ntBASIC11.97□□□□□ -0.49
CEACAM3P40198 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CEACAM3P40198 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CEACAM3P40198 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.97□□□□□ -0.49
CEACAM3P40198 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.97□□□□□ -0.49
CEACAM3P40198 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms