Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.8□□□□□ -0.36
GDNFP39905 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.8□□□□□ -0.36
GDNFP39905 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
GDNFP39905 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 CLK3P2-201ENST00000427566 1453 ntBASIC12.79□□□□□ -0.36
GDNFP39905 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.79□□□□□ -0.36
GDNFP39905 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
GDNFP39905 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 MEIS3P1-201ENST00000495167 958 ntBASIC12.79□□□□□ -0.36
GDNFP39905 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.79□□□□□ -0.36
GDNFP39905 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.79□□□□□ -0.36
GDNFP39905 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.79□□□□□ -0.36
GDNFP39905 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 AL391069.4-201ENST00000609583 481 ntBASIC12.79□□□□□ -0.36
GDNFP39905 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GDNFP39905 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GDNFP39905 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GDNFP39905 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
GDNFP39905 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.78□□□□□ -0.36
GDNFP39905 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.78□□□□□ -0.36
GDNFP39905 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
GDNFP39905 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 PCDHB18P-202ENST00000526308 3197 ntBASIC12.78□□□□□ -0.36
GDNFP39905 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
GDNFP39905 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GDNFP39905 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GDNFP39905 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
GDNFP39905 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms