Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.32□□□□□ -0.12
TRIM23P36406 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRIM23P36406 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRIM23P36406 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM23P36406 ELK2AP-201ENST00000392510 1007 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM23P36406 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.31□□□□□ -0.12
TRIM23P36406 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM23P36406 AC134698.3-201ENST00000523880 214 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 FGFR3P5-201ENST00000564496 886 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 AC021016.3-201ENST00000608367 477 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 MIR6769A-201ENST00000617340 73 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 AC015967.2-201ENST00000624092 234 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 AC006435.4-201ENST00000625037 234 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 AL356737.1-201ENST00000634391 234 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 FRMPD2B-201ENST00000431305 1347 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 AC064801.2-201ENST00000625052 1303 ntBASIC14.31□□□□□ -0.12
TRIM23P36406 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM23P36406 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM23P36406 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM23P36406 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 AP002353.1-201ENST00000528257 1599 ntBASIC14.3□□□□□ -0.12
TRIM23P36406 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRIM23P36406 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM23P36406 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.3□□□□□ -0.12
TRIM23P36406 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM23P36406 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM23P36406 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM23P36406 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM23P36406 RTN3P1-201ENST00000536295 711 ntBASIC14.3□□□□□ -0.12
TRIM23P36406 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
TRIM23P36406 AC026803.1-201ENST00000569130 274 ntBASIC14.3□□□□□ -0.12
TRIM23P36406 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM23P36406 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM23P36406 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms