Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CKS2P33552 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 FAM210CP-201ENST00000445714 574 ntBASIC10.79□□□□□ -0.68
CKS2P33552 TIMM8BP1-201ENST00000452384 211 ntBASIC10.79□□□□□ -0.68
CKS2P33552 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.79□□□□□ -0.68
CKS2P33552 KRT18P35-201ENST00000510488 1269 ntBASIC10.79□□□□□ -0.68
CKS2P33552 BANF1P1-201ENST00000553684 263 ntBASIC10.79□□□□□ -0.68
CKS2P33552 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.79□□□□□ -0.68
CKS2P33552 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.79□□□□□ -0.68
CKS2P33552 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 AC012313.10-201ENST00000623509 926 ntBASIC10.79□□□□□ -0.68
CKS2P33552 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
CKS2P33552 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC10.79□□□□□ -0.68
CKS2P33552 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CKS2P33552 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.79□□□□□ -0.68
CKS2P33552 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CKS2P33552 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 KRT8P14-201ENST00000414254 1442 ntBASIC10.78□□□□□ -0.68
CKS2P33552 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 NME1-209ENST00000511355 1645 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CKS2P33552 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 TOMM22P5-201ENST00000416399 439 ntBASIC10.78□□□□□ -0.68
CKS2P33552 FAM58CP-201ENST00000435741 640 ntBASIC10.78□□□□□ -0.68
CKS2P33552 AL592309.1-201ENST00000443127 649 ntBASIC10.78□□□□□ -0.68
CKS2P33552 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS2P33552 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.78□□□□□ -0.68
CKS2P33552 SERBP1P3-201ENST00000459980 809 ntBASIC10.78□□□□□ -0.68
CKS2P33552 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.78□□□□□ -0.68
CKS2P33552 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 KRT8P48-201ENST00000515599 1220 ntBASIC10.78□□□□□ -0.68
CKS2P33552 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.78□□□□□ -0.68
CKS2P33552 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CKS2P33552 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 AP001005.1-201ENST00000571755 1248 ntBASIC10.78□□□□□ -0.68
CKS2P33552 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS2P33552 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS2P33552 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 AC092364.2-202ENST00000597012 1073 ntBASIC10.78□□□□□ -0.68
CKS2P33552 RN7SL828P-201ENST00000607615 303 ntBASIC10.78□□□□□ -0.68
CKS2P33552 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS2P33552 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS2P33552 LINC00628-201ENST00000628516 1289 ntBASIC10.78□□□□□ -0.68
CKS2P33552 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS2P33552 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms