Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CPS1P31327 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CPS1P31327 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.93■□□□□ 0.78
CPS1P31327 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CPS1P31327 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CPS1P31327 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.93■□□□□ 0.78
CPS1P31327 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.93■□□□□ 0.78
CPS1P31327 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC19.93■□□□□ 0.78
CPS1P31327 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 RN7SKP212-201ENST00000410851 328 ntBASIC19.93■□□□□ 0.78
CPS1P31327 RN7SL351P-201ENST00000469306 248 ntBASIC19.93■□□□□ 0.78
CPS1P31327 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC19.93■□□□□ 0.78
CPS1P31327 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.93■□□□□ 0.78
CPS1P31327 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC19.93■□□□□ 0.78
CPS1P31327 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC19.93■□□□□ 0.78
CPS1P31327 TPST2P1-201ENST00000564073 1102 ntBASIC19.93■□□□□ 0.78
CPS1P31327 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 RN7SL605P-201ENST00000577229 281 ntBASIC19.93■□□□□ 0.78
CPS1P31327 KRT8P34-201ENST00000577607 1044 ntBASIC19.93■□□□□ 0.78
CPS1P31327 RN7SL455P-201ENST00000580629 282 ntBASIC19.93■□□□□ 0.78
CPS1P31327 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CPS1P31327 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.93■□□□□ 0.78
CPS1P31327 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CPS1P31327 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CPS1P31327 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CPS1P31327 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CPS1P31327 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPS1P31327 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 CDKN2A-AS1-201ENST00000441769 823 ntBASIC19.92■□□□□ 0.78
CPS1P31327 RNU1-80P-201ENST00000459500 161 ntBASIC19.92■□□□□ 0.78
CPS1P31327 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC19.92■□□□□ 0.78
CPS1P31327 GOLGA2P8-201ENST00000505201 779 ntBASIC19.92■□□□□ 0.78
CPS1P31327 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 MST1L-204ENST00000545160 559 ntTSL 4 BASIC19.92■□□□□ 0.78
CPS1P31327 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.92■□□□□ 0.78
CPS1P31327 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC19.92■□□□□ 0.78
CPS1P31327 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 AMT-256ENST00000638063 1783 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPS1P31327 CICP6-201ENST00000457191 2729 ntBASIC19.92■□□□□ 0.78
CPS1P31327 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CPS1P31327 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 AC006486.2-201ENST00000624246 2199 ntBASIC19.92■□□□□ 0.78
CPS1P31327 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CPS1P31327 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CPS1P31327 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC19.92■□□□□ 0.78
CPS1P31327 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC19.92■□□□□ 0.78
CPS1P31327 AL954722.1-201ENST00000431238 259 ntBASIC19.92■□□□□ 0.78
CPS1P31327 EEF1DP2-201ENST00000433698 843 ntBASIC19.92■□□□□ 0.78
CPS1P31327 RPSAP12-201ENST00000435879 888 ntBASIC19.92■□□□□ 0.78
CPS1P31327 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CPS1P31327 RNASEH2CP1-201ENST00000454281 502 ntBASIC19.92■□□□□ 0.78
CPS1P31327 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC19.92■□□□□ 0.78
CPS1P31327 AC099328.1-201ENST00000498809 1030 ntBASIC19.92■□□□□ 0.78
CPS1P31327 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC19.92■□□□□ 0.78
CPS1P31327 AC022447.6-201ENST00000515522 438 ntBASIC19.92■□□□□ 0.78
CPS1P31327 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC19.92■□□□□ 0.78
CPS1P31327 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms