Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.04□□□□□ -0.32
HOXC12P31275 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.04□□□□□ -0.32
HOXC12P31275 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.04□□□□□ -0.32
HOXC12P31275 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.04□□□□□ -0.32
HOXC12P31275 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 RN7SL720P-201ENST00000488178 304 ntBASIC13.04□□□□□ -0.32
HOXC12P31275 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.04□□□□□ -0.32
HOXC12P31275 AC245884.6-201ENST00000515672 1067 ntBASIC13.04□□□□□ -0.32
HOXC12P31275 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.04□□□□□ -0.32
HOXC12P31275 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.04□□□□□ -0.32
HOXC12P31275 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
HOXC12P31275 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.04□□□□□ -0.32
HOXC12P31275 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HOXC12P31275 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 AL138725.1-201ENST00000407347 1314 ntBASIC13.04□□□□□ -0.32
HOXC12P31275 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.04□□□□□ -0.32
HOXC12P31275 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 DBET-201ENST00000630918 3363 ntBASIC13.04□□□□□ -0.32
HOXC12P31275 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HOXC12P31275 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HOXC12P31275 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 MIR33B-201ENST00000385104 96 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 MIR769-201ENST00000390225 118 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.03□□□□□ -0.32
HOXC12P31275 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 AL133466.1-201ENST00000447582 150 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 HSPB1P2-201ENST00000448722 546 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.03□□□□□ -0.32
HOXC12P31275 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.03□□□□□ -0.32
HOXC12P31275 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.03□□□□□ -0.32
HOXC12P31275 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.03□□□□□ -0.32
HOXC12P31275 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 MIR5572-201ENST00000583188 137 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 AL136172.1-201ENST00000598590 1394 ntBASIC13.03□□□□□ -0.32
HOXC12P31275 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.03□□□□□ -0.32
HOXC12P31275 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.03□□□□□ -0.32
HOXC12P31275 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HOXC12P31275 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms