Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.68□□□□□ -0.22
NR4A1P22736 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NR4A1P22736 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NR4A1P22736 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NR4A1P22736 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.67□□□□□ -0.22
NR4A1P22736 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NR4A1P22736 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.67□□□□□ -0.22
NR4A1P22736 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.67□□□□□ -0.22
NR4A1P22736 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.67□□□□□ -0.22
NR4A1P22736 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.67□□□□□ -0.22
NR4A1P22736 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.67□□□□□ -0.22
NR4A1P22736 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.67□□□□□ -0.22
NR4A1P22736 DOC2GP-202ENST00000514950 1163 ntBASIC13.67□□□□□ -0.22
NR4A1P22736 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 AC104794.3-201ENST00000566840 1248 ntBASIC13.67□□□□□ -0.22
NR4A1P22736 AC092337.1-201ENST00000568699 1129 ntBASIC13.67□□□□□ -0.22
NR4A1P22736 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.67□□□□□ -0.22
NR4A1P22736 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.67□□□□□ -0.22
NR4A1P22736 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.67□□□□□ -0.22
NR4A1P22736 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.67□□□□□ -0.22
NR4A1P22736 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.67□□□□□ -0.22
NR4A1P22736 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.67□□□□□ -0.22
NR4A1P22736 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 CES1P1-201ENST00000421606 1704 ntBASIC13.67□□□□□ -0.22
NR4A1P22736 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 AC012508.2-201ENST00000567613 1472 ntBASIC13.67□□□□□ -0.22
NR4A1P22736 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
NR4A1P22736 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NR4A1P22736 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.66□□□□□ -0.22
NR4A1P22736 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NR4A1P22736 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.66□□□□□ -0.22
NR4A1P22736 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.66□□□□□ -0.22
NR4A1P22736 PIN1P1-201ENST00000412108 996 ntBASIC13.66□□□□□ -0.22
NR4A1P22736 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.66□□□□□ -0.22
NR4A1P22736 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.66□□□□□ -0.22
NR4A1P22736 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 LINC02084-201ENST00000606069 1096 ntBASIC13.66□□□□□ -0.22
NR4A1P22736 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NR4A1P22736 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.66□□□□□ -0.22
NR4A1P22736 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.66□□□□□ -0.22
NR4A1P22736 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR4A1P22736 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms