Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX1P22670 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX1P22670 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.92■□□□□ 0.14
RFX1P22670 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RFX1P22670 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX1P22670 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 RN7SL769P-201ENST00000469386 295 ntBASIC15.92■□□□□ 0.14
RFX1P22670 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX1P22670 RPSAP36-202ENST00000494591 1261 ntBASIC15.92■□□□□ 0.14
RFX1P22670 AL391280.1-201ENST00000506969 1062 ntBASIC15.92■□□□□ 0.14
RFX1P22670 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.92■□□□□ 0.14
RFX1P22670 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 AL096828.3-201ENST00000615354 462 ntBASIC15.92■□□□□ 0.14
RFX1P22670 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.92■□□□□ 0.14
RFX1P22670 AC138627.1-207ENST00000641560 1006 ntBASIC15.92■□□□□ 0.14
RFX1P22670 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 AC016397.2-201ENST00000624848 1985 ntBASIC15.92■□□□□ 0.14
RFX1P22670 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFX1P22670 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
RFX1P22670 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.92■□□□□ 0.14
RFX1P22670 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX1P22670 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.92■□□□□ 0.14
RFX1P22670 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RFX1P22670 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFX1P22670 AC006504.5-208ENST00000588784 2401 ntBASIC15.92■□□□□ 0.14
RFX1P22670 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.91■□□□□ 0.14
RFX1P22670 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 AC020910.5-201ENST00000623668 1865 ntBASIC15.91■□□□□ 0.14
RFX1P22670 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.91■□□□□ 0.14
RFX1P22670 Z97180.1-201ENST00000445173 988 ntBASIC15.91■□□□□ 0.14
RFX1P22670 LDHBP1-201ENST00000455730 1119 ntBASIC15.91■□□□□ 0.14
RFX1P22670 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 TMEM198B-204ENST00000484016 896 ntBASIC15.91■□□□□ 0.14
RFX1P22670 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
RFX1P22670 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.91■□□□□ 0.14
RFX1P22670 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 MIR7845-201ENST00000618396 99 ntBASIC15.91■□□□□ 0.14
RFX1P22670 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
RFX1P22670 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.91■□□□□ 0.14
RFX1P22670 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFX1P22670 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.9■□□□□ 0.14
RFX1P22670 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.9■□□□□ 0.14
RFX1P22670 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.9■□□□□ 0.14
RFX1P22670 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RFX1P22670 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFX1P22670 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms