Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 AC138969.3-201ENST00000546612 1459 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 AC138932.2-201ENST00000548268 1459 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 AC126755.4-201ENST00000549796 1459 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 TCAM1P-207ENST00000485295 1537 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 IGLL3P-201ENST00000412472 434 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 VN2R19P-201ENST00000442399 1052 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 LINC01711-201ENST00000598340 967 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 AL161645.1-201ENST00000622716 1255 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 AC093458.2-201ENST00000623150 629 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 TP73-AS1-207ENST00000624167 988 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 AC007064.4-201ENST00000637740 555 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.26□□□□□ -0.61
RAB4AP20338 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.26□□□□□ -0.61
RAB4AP20338 AL109976.1-201ENST00000621919 5678 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RAB4AP20338 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
RAB4AP20338 AC023794.5-201ENST00000564380 2157 ntBASIC11.26□□□□□ -0.61
RAB4AP20338 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RAB4AP20338 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB4AP20338 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 NT5C3AP1-202ENST00000441170 1663 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RAB4AP20338 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RAB4AP20338 AC136604.1-201ENST00000418535 575 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 RHOQP3-201ENST00000437982 621 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 AL139010.1-201ENST00000454878 894 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 AC108751.1-201ENST00000490852 363 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC11.25□□□□□ -0.61
RAB4AP20338 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 AC096734.2-201ENST00000562054 433 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 AC023141.13-201ENST00000604991 943 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms