Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.52■□□□□ 0.4
NCLP19338 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.52■□□□□ 0.4
NCLP19338 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.52■□□□□ 0.4
NCLP19338 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
NCLP19338 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.52■□□□□ 0.4
NCLP19338 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.52■□□□□ 0.4
NCLP19338 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.52■□□□□ 0.4
NCLP19338 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.52■□□□□ 0.4
NCLP19338 TIMM17BP1-201ENST00000545713 516 ntBASIC17.52■□□□□ 0.4
NCLP19338 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NCLP19338 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.52■□□□□ 0.4
NCLP19338 AC104794.3-201ENST00000566840 1248 ntBASIC17.52■□□□□ 0.4
NCLP19338 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 AL132655.2-201ENST00000596276 594 ntBASIC17.52■□□□□ 0.4
NCLP19338 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.52■□□□□ 0.4
NCLP19338 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.52■□□□□ 0.4
NCLP19338 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.52■□□□□ 0.4
NCLP19338 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCLP19338 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.52■□□□□ 0.4
NCLP19338 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.52■□□□□ 0.39
NCLP19338 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NCLP19338 AL137783.1-201ENST00000623494 1896 ntBASIC17.52■□□□□ 0.39
NCLP19338 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.52■□□□□ 0.39
NCLP19338 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCLP19338 AC012617.1-204ENST00000586340 2305 ntBASIC17.52■□□□□ 0.39
NCLP19338 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.52■□□□□ 0.39
NCLP19338 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 AC007541.1-201ENST00000570282 1469 ntBASIC17.51■□□□□ 0.39
NCLP19338 Z82170.1-201ENST00000625081 3192 ntBASIC17.51■□□□□ 0.39
NCLP19338 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.51■□□□□ 0.39
NCLP19338 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 AL353779.1-201ENST00000434793 351 ntBASIC17.51■□□□□ 0.39
NCLP19338 GAPDHP21-201ENST00000450301 1010 ntBASIC17.51■□□□□ 0.39
NCLP19338 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 AC000095.1-201ENST00000603208 874 ntBASIC17.51■□□□□ 0.39
NCLP19338 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 TCAF1P1-201ENST00000414990 2232 ntBASIC17.51■□□□□ 0.39
NCLP19338 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC17.51■□□□□ 0.39
NCLP19338 AC019294.4-201ENST00000561777 2905 ntBASIC17.51■□□□□ 0.39
NCLP19338 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCLP19338 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.51■□□□□ 0.39
NCLP19338 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NCLP19338 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCLP19338 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms