Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AC027601.3-201ENST00000622907 509 ntBASIC13.11□□□□□ -0.31
HLA-DOBP13765 AC008687.7-202ENST00000637404 953 ntBASIC13.11□□□□□ -0.31
HLA-DOBP13765 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 E2F3P2-201ENST00000447755 1422 ntBASIC13.11□□□□□ -0.31
HLA-DOBP13765 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 SHC1P1-201ENST00000425230 1745 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 AC020910.6-201ENST00000623084 1459 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 MIR326-201ENST00000362220 95 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 AC010141.1-201ENST00000411585 623 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 AC099336.1-201ENST00000417053 1171 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 HLA-V-201ENST00000429037 534 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 AC119751.2-201ENST00000504529 210 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 AC079316.1-201ENST00000548397 411 ntBASIC13.1□□□□□ -0.31
HLA-DOBP13765 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.1□□□□□ -0.31
HLA-DOBP13765 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HLA-DOBP13765 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 ST20-AS1-201ENST00000560255 4223 ntBASIC13.09□□□□□ -0.31
HLA-DOBP13765 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 CSF2RBP1-201ENST00000447905 391 ntBASIC13.09□□□□□ -0.31
HLA-DOBP13765 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AC022210.1-201ENST00000449856 793 ntBASIC13.09□□□□□ -0.31
HLA-DOBP13765 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.09□□□□□ -0.31
HLA-DOBP13765 AL023775.1-201ENST00000454907 1746 ntBASIC13.09□□□□□ -0.31
HLA-DOBP13765 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
HLA-DOBP13765 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms