Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 AC010141.1-201ENST00000411585 623 ntBASIC13.65□□□□□ -0.22
HMGN2P05204 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.65□□□□□ -0.22
HMGN2P05204 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 CNN2P10-201ENST00000443067 918 ntBASIC13.65□□□□□ -0.22
HMGN2P05204 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.65□□□□□ -0.22
HMGN2P05204 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.65□□□□□ -0.22
HMGN2P05204 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 KRT8P24-201ENST00000560290 1559 ntBASIC13.65□□□□□ -0.22
HMGN2P05204 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HMGN2P05204 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HMGN2P05204 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HMGN2P05204 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
HMGN2P05204 AC064801.2-201ENST00000625052 1303 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 SHC1P1-201ENST00000425230 1745 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.64□□□□□ -0.23
HMGN2P05204 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 BOLA2P3-201ENST00000404566 256 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.64□□□□□ -0.23
HMGN2P05204 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 HOMER2P2-201ENST00000451621 847 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGN2P05204 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGN2P05204 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 AC005586.2-201ENST00000563946 837 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 AC106886.1-201ENST00000568660 600 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.64□□□□□ -0.23
HMGN2P05204 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
HMGN2P05204 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 CICP4-201ENST00000447359 2812 ntBASIC13.64□□□□□ -0.23
HMGN2P05204 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.64□□□□□ -0.23
HMGN2P05204 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HMGN2P05204 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.64□□□□□ -0.23
HMGN2P05204 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms