Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 AC015818.8-201ENST00000587907 1519 ntBASIC13.01□□□□□ -0.33
TRAF3IP2O43734 TMBIM7P-202ENST00000641474 1516 ntBASIC13.01□□□□□ -0.33
TRAF3IP2O43734 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAF3IP2O43734 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 HSPA8P5-201ENST00000456928 2069 ntBASIC13□□□□□ -0.33
TRAF3IP2O43734 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 GRK6P1-201ENST00000400595 1711 ntBASIC13□□□□□ -0.33
TRAF3IP2O43734 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13□□□□□ -0.33
TRAF3IP2O43734 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 AL008718.2-201ENST00000609206 1313 ntBASIC13□□□□□ -0.33
TRAF3IP2O43734 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRAF3IP2O43734 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRAF3IP2O43734 AL161932.2-201ENST00000435436 679 ntBASIC13□□□□□ -0.33
TRAF3IP2O43734 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13□□□□□ -0.33
TRAF3IP2O43734 AC005586.2-201ENST00000563946 837 ntBASIC13□□□□□ -0.33
TRAF3IP2O43734 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 AL162426.1-201ENST00000624141 743 ntBASIC13□□□□□ -0.33
TRAF3IP2O43734 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRAF3IP2O43734 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13□□□□□ -0.33
TRAF3IP2O43734 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.99□□□□□ -0.33
TRAF3IP2O43734 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms