Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.72□□□□□ -0.05
KDELR3O43731 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.72□□□□□ -0.05
KDELR3O43731 AC152010.1-201ENST00000415779 2006 ntBASIC14.72□□□□□ -0.05
KDELR3O43731 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
KDELR3O43731 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 AC005077.2-201ENST00000449786 690 ntBASIC14.72□□□□□ -0.05
KDELR3O43731 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.72□□□□□ -0.05
KDELR3O43731 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.72□□□□□ -0.05
KDELR3O43731 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.72□□□□□ -0.05
KDELR3O43731 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.72□□□□□ -0.05
KDELR3O43731 MIR3188-201ENST00000583494 85 ntBASIC14.72□□□□□ -0.05
KDELR3O43731 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 AC091544.8-201ENST00000619490 361 ntBASIC14.72□□□□□ -0.05
KDELR3O43731 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.72□□□□□ -0.05
KDELR3O43731 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
KDELR3O43731 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.72□□□□□ -0.05
KDELR3O43731 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.72□□□□□ -0.05
KDELR3O43731 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 AP002353.1-201ENST00000528257 1599 ntBASIC14.72□□□□□ -0.05
KDELR3O43731 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
KDELR3O43731 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
KDELR3O43731 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KDELR3O43731 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 OR2I1P-210ENST00000642037 4691 ntBASIC14.71□□□□□ -0.05
KDELR3O43731 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
KDELR3O43731 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 CYP46A4P-201ENST00000414953 267 ntBASIC14.71□□□□□ -0.05
KDELR3O43731 TSPY25P-201ENST00000429463 745 ntBASIC14.71□□□□□ -0.05
KDELR3O43731 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 AC092580.1-201ENST00000433998 658 ntBASIC14.71□□□□□ -0.05
KDELR3O43731 SPTLC1P5-201ENST00000450718 252 ntBASIC14.71□□□□□ -0.05
KDELR3O43731 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.71□□□□□ -0.05
KDELR3O43731 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.71□□□□□ -0.05
KDELR3O43731 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.71□□□□□ -0.05
KDELR3O43731 ACTG1P17-201ENST00000558391 1119 ntBASIC14.71□□□□□ -0.05
KDELR3O43731 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.71□□□□□ -0.05
KDELR3O43731 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.71□□□□□ -0.05
KDELR3O43731 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.71□□□□□ -0.05
KDELR3O43731 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
KDELR3O43731 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
KDELR3O43731 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KDELR3O43731 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
KDELR3O43731 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms