Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RIPK2O43353 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RIPK2O43353 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.84□□□□□ -0.03
RIPK2O43353 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RIPK2O43353 AC004449.1-201ENST00000564240 433 ntBASIC14.84□□□□□ -0.03
RIPK2O43353 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.84□□□□□ -0.03
RIPK2O43353 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.84□□□□□ -0.03
RIPK2O43353 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RIPK2O43353 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.84□□□□□ -0.03
RIPK2O43353 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIPK2O43353 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIPK2O43353 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIPK2O43353 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.83□□□□□ -0.03
RIPK2O43353 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RIPK2O43353 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RIPK2O43353 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RIPK2O43353 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RIPK2O43353 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.83□□□□□ -0.03
RIPK2O43353 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
RIPK2O43353 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIPK2O43353 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RIPK2O43353 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RIPK2O43353 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RIPK2O43353 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 MIR943-201ENST00000401286 94 ntBASIC14.83□□□□□ -0.04
RIPK2O43353 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.83□□□□□ -0.04
RIPK2O43353 AL161932.2-201ENST00000435436 679 ntBASIC14.83□□□□□ -0.04
RIPK2O43353 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.83□□□□□ -0.04
RIPK2O43353 DOC2GP-202ENST00000514950 1163 ntBASIC14.83□□□□□ -0.04
RIPK2O43353 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.83□□□□□ -0.04
RIPK2O43353 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.83□□□□□ -0.04
RIPK2O43353 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.83□□□□□ -0.04
RIPK2O43353 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.83□□□□□ -0.04
RIPK2O43353 KRT18P8-201ENST00000581937 1246 ntBASIC14.83□□□□□ -0.04
RIPK2O43353 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.83□□□□□ -0.04
RIPK2O43353 AC104506.1-201ENST00000609247 429 ntBASIC14.83□□□□□ -0.04
RIPK2O43353 MIR8072-201ENST00000614241 80 ntBASIC14.83□□□□□ -0.04
RIPK2O43353 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RIPK2O43353 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RIPK2O43353 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIPK2O43353 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.83□□□□□ -0.04
RIPK2O43353 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RIPK2O43353 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.82□□□□□ -0.04
RIPK2O43353 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.82□□□□□ -0.04
RIPK2O43353 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RIPK2O43353 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 AC022144.1-201ENST00000602255 1580 ntBASIC14.82□□□□□ -0.04
RIPK2O43353 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
RIPK2O43353 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIPK2O43353 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms