Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.74□□□□□ -0.53
UPK2O00526 AC005586.2-201ENST00000563946 837 ntBASIC11.74□□□□□ -0.53
UPK2O00526 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
UPK2O00526 MIR4745-201ENST00000577608 62 ntBASIC11.74□□□□□ -0.53
UPK2O00526 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.74□□□□□ -0.53
UPK2O00526 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 KRT8P28-201ENST00000433288 1390 ntBASIC11.74□□□□□ -0.53
UPK2O00526 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.74□□□□□ -0.53
UPK2O00526 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.74□□□□□ -0.53
UPK2O00526 AC130686.1-201ENST00000622936 2466 ntBASIC11.74□□□□□ -0.53
UPK2O00526 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
UPK2O00526 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
UPK2O00526 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
UPK2O00526 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
UPK2O00526 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
UPK2O00526 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 AP006294.1-201ENST00000415407 339 ntBASIC11.73□□□□□ -0.53
UPK2O00526 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.73□□□□□ -0.53
UPK2O00526 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
UPK2O00526 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.73□□□□□ -0.53
UPK2O00526 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 RNA5SP486-201ENST00000515961 83 ntBASIC11.73□□□□□ -0.53
UPK2O00526 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.73□□□□□ -0.53
UPK2O00526 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
UPK2O00526 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.73□□□□□ -0.53
UPK2O00526 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 AC023794.5-201ENST00000564380 2157 ntBASIC11.73□□□□□ -0.53
UPK2O00526 AC015818.8-201ENST00000587907 1519 ntBASIC11.73□□□□□ -0.53
UPK2O00526 ECM1P1-201ENST00000604092 1279 ntBASIC11.73□□□□□ -0.53
UPK2O00526 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 AC002472.3-201ENST00000640124 621 ntBASIC11.73□□□□□ -0.53
UPK2O00526 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK2O00526 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK2O00526 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
UPK2O00526 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK2O00526 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC11.73□□□□□ -0.53
UPK2O00526 AC092053.3-201ENST00000641308 4975 ntBASIC11.72□□□□□ -0.53
UPK2O00526 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms