Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AL845472.1-202ENST00000624675 4080 ntBASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 LAGE3P1-201ENST00000425356 484 ntBASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 RNA5SP410-201ENST00000516285 106 ntBASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 KRT18P8-201ENST00000581937 1246 ntBASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 KRT8P35-201ENST00000483942 1338 ntBASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 AL360270.3-201ENST00000609118 1348 ntBASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AOC4P-203ENST00000566825 2289 ntBASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AP002008.2-201ENST00000635926 4870 ntBASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 RCN1P1-201ENST00000400413 996 ntBASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AC136632.2-201ENST00000512891 861 ntBASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 AL136038.3-201ENST00000561909 1096 ntBASIC11.06□□□□□ -0.64
TRAPPC1Q9Y5R8 OR7E47P-204ENST00000575924 449 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms