Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 BCRP2-202ENST00000447763 634 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AC007389.4-201ENST00000454674 793 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 TMEM198B-204ENST00000484016 896 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AC011495.1-201ENST00000498085 584 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 BCRP6-201ENST00000510112 632 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 BCRP7-201ENST00000511549 544 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 SLC25A47P1-201ENST00000531577 414 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 BX088702.1-201ENST00000610784 235 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AP000593.2-201ENST00000542775 1433 ntBASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF11Q9Y3C5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC005229.1-201ENST00000392885 409 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC092933.1-201ENST00000393644 945 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 RN7SKP175-201ENST00000408472 289 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 INE1-201ENST00000456273 945 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AL590640.2-201ENST00000457038 527 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 RN7SL692P-201ENST00000464677 288 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC106820.3-201ENST00000561653 397 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC027307.3-201ENST00000594262 1100 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC020910.6-201ENST00000623084 1459 ntBASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RNF11Q9Y3C5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms