Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 AC078875.1-201ENST00000431907 724 ntBASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 AL133499.1-201ENST00000596207 608 ntBASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 CICP24-201ENST00000605464 2705 ntBASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX2IPQ9Y2D8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC126365.1-201ENST00000578585 1514 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 PDIA3P2-201ENST00000428073 158 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 KLF2P1-201ENST00000447438 1042 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 CICP12-201ENST00000455801 843 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 SCARNA21-201ENST00000517026 139 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 RTN3P1-201ENST00000536295 711 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC005962.1-201ENST00000584100 773 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 SPCS2P2-201ENST00000603270 608 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC012044.1-201ENST00000603431 297 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AC026748.1-201ENST00000624349 3251 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 AL122018.1-201ENST00000446607 2310 ntBASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX2IPQ9Y2D8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC023908.3-201ENST00000564211 3047 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 MIR33B-201ENST00000385104 96 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AL157407.1-201ENST00000435784 904 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms