Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 FTLP3-201ENST00000427242 528 ntBASIC13.18□□□□□ -0.3
CHD8Q9HCK8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC13.18□□□□□ -0.3
CHD8Q9HCK8 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CHD8Q9HCK8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 MKL1-204ENST00000402630 747 ntTSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC091691.1-201ENST00000583587 1018 ntBASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC099552.4-201ENST00000624248 949 ntBASIC13.17□□□□□ -0.3
CHD8Q9HCK8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 KRT8P18-201ENST00000413425 1445 ntBASIC13.17□□□□□ -0.3
CHD8Q9HCK8 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 PDPN-208ENST00000509009 571 ntTSL 4 BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC100858.1-201ENST00000514059 1228 ntBASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AC015818.3-201ENST00000583797 589 ntBASIC13.17□□□□□ -0.3
CHD8Q9HCK8 AL049840.2-201ENST00000602722 535 ntBASIC13.17□□□□□ -0.3
CHD8Q9HCK8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CHD8Q9HCK8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 BX679664.3-201ENST00000414070 555 ntBASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AC113935.1-201ENST00000471722 555 ntBASIC13.16□□□□□ -0.3
CHD8Q9HCK8 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CHD8Q9HCK8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms