Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AL133338.1-201ENST00000565695 1517 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 MBLAC2-202ENST00000514906 1936 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 FTH1P14-201ENST00000482930 551 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 RNA5SP486-201ENST00000515961 83 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SORD2P-201ENST00000558556 1069 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 KRT8P24-201ENST00000560290 1559 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 AC130686.1-201ENST00000622936 2466 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 PTENP1-202ENST00000532280 3996 ntBASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 KRT8P28-201ENST00000433288 1390 ntBASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 AC079776.1-201ENST00000401540 1152 ntBASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ALG3P1-201ENST00000508806 1114 ntBASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 AL359881.3-201ENST00000602640 1721 ntBASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
UPF3BQ9BZI7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms